Source code for dismalpy.ssm.structural

"""
SARIMAX Model

Author: Chad Fulton
License: Simplified-BSD
"""
from __future__ import division, absolute_import, print_function

import numpy as np
from .mlemodel import MLEMixin, MLEResultsMixin
try:
    from statsmodels.tsa.statespace import varmax
    from statsmodels.tsa.statespace import mlemodel, structural
except ImportError:
    from .compat import mlemodel, structural

import statsmodels.base.wrapper as wrap

[docs]class UnobservedComponents(MLEMixin, structural.UnobservedComponents): r""" Univariate unobserved components time series model These are also known as structural time series models, and decompose a (univariate) time series into trend, seasonal, cyclical, and irregular components. Parameters ---------- level : bool or string, optional Whether or not to include a level component. Default is False. Can also be a string specification of the level / trend component; see Notes for available model specification strings. trend : bool, optional Whether or not to include a trend component. Default is False. If True, `level` must also be True. seasonal_period : int or None, optional The period of the seasonal component. Default is None. cycle : bool, optional Whether or not to include a cycle component. Default is False. ar : int or None, optional The order of the autoregressive component. Default is None. exog : array_like or None, optional Exoenous variables. irregular : bool, optional Whether or not to include an irregular component. Default is False. stochastic_level : bool, optional Whether or not any level component is stochastic. Default is False. stochastic_trend : bool, optional Whether or not any trend component is stochastic. Default is False. stochastic_seasonal : bool, optional Whether or not any seasonal component is stochastic. Default is False. stochastic_cycle : bool, optional Whether or not any cycle component is stochastic. Default is False. damped_cycle : bool, optional Whether or not the cycle component is damped. Default is False. cycle_period_bounds : tuple, optional A tuple with lower and upper allowed bounds for the period of the cycle. If not provided, the following default bounds are used: (1) if no date / time information is provided, the frequency is constrained to be between zero and :math:`\pi`, so the period is constrained to be in [0.5, infinity]. (2) If the date / time information is provided, the default bounds allow the cyclical component to be between 1.5 and 12 years; depending on the frequency of the endogenous variable, this will imply different specific bounds. Notes ----- Thse models take the general form (see [1]_ Chapter 3.2 for all details) .. math:: y_t = \mu_t + \gamma_t + c_t + \varepsilon_t where :math:`y_t` refers to the observation vector at time :math:`t`, :math:`\mu_t` refers to the trend component, :math:`\gamma_t` refers to the seasonal component, :math:`c_t` refers to the cycle, and :math:`\varepsilon_t` is the irregular. The modeling details of these components are given below. **Trend** The trend component is a dynamic extension of a regression model that includes an intercept and linear time-trend. It can be written: .. math:: \mu_t = \mu_{t-1} + \beta_{t-1} + \eta_{t-1} \\ \beta_t = \beta_{t-1} + \zeta_{t-1} where the level is a generalization of the intercept term that can dynamically vary across time, and the trend is a generalization of the time-trend such that the slope can dynamically vary across time. Here :math:`\eta_t \sim N(0, \sigma_\eta^2)` and :math:`\zeta_t \sim N(0, \sigma_\zeta^2)`. For both elements (level and trend), we can consider models in which: - The element is included vs excluded (if the trend is included, there must also be a level included). - The element is deterministic vs stochastic (i.e. whether or not the variance on the error term is confined to be zero or not) The only additional parameters to be estimated via MLE are the variances of any included stochastic components. The level/trend components can be specified using the boolean keyword arguments `level`, `stochastic_level`, `trend`, etc., or all at once as a string argument to `level`. The following table shows the available model specifications: +----------------------------------+--------------------------------------+--------------------+--------------------------------------------------+ | Model name | Full string syntax | Abbreviated syntax | Model | +==================================+======================================+====================+==================================================+ | No trend | `'irregular'` | `'ntrend'` | .. math:: y_t &= \varepsilon_t | +----------------------------------+--------------------------------------+--------------------+--------------------------------------------------+ | Fixed intercept | `'fixed intercept'` | | .. math:: y_t &= \mu | +----------------------------------+--------------------------------------+--------------------+--------------------------------------------------+ | Deterministic constant | `'deterministic constant'` | `'dconstant'` | .. math:: y_t &= \mu + \varepsilon_t | +----------------------------------+--------------------------------------+--------------------+--------------------------------------------------+ | Local level | `'local level'` | `'llevel'` | .. math:: y_t &= \mu_t + \varepsilon_t \\ | | | | | \mu_t &= \mu_{t-1} + \eta_t | +----------------------------------+--------------------------------------+--------------------+--------------------------------------------------+ | Random walk | `'random walk'` | `'rwalk'` | .. math:: y_t &= \mu_t \\ | | | | | \mu_t &= \mu_{t-1} + \eta_t | +----------------------------------+--------------------------------------+--------------------+--------------------------------------------------+ | Fixed slope | `'fixed slope'` | | .. math:: y_t &= \mu_t \\ | | | | | \mu_t &= \mu_{t-1} + \beta | +----------------------------------+--------------------------------------+--------------------+--------------------------------------------------+ | Deterministic trend | `'deterministic trend'` | `'dtrend'` | .. math:: y_t &= \mu_t + \varepsilon_t \\ | | | | | \mu_t &= \mu_{t-1} + \beta | +----------------------------------+--------------------------------------+--------------------+--------------------------------------------------+ | Local linear deterministic trend | `'local linear deterministic trend'` | `'lldtrend'` | .. math:: y_t &= \mu_t + \varepsilon_t \\ | | | | | \mu_t &= \mu_{t-1} + \beta + \eta_t | +----------------------------------+--------------------------------------+--------------------+--------------------------------------------------+ | Random walk with drift | `'random walk with drift'` | `'rwdrift'` | .. math:: y_t &= \mu_t \\ | | | | | \mu_t &= \mu_{t-1} + \beta + \eta_t | +----------------------------------+--------------------------------------+--------------------+--------------------------------------------------+ | Local linear trend | `'local linear trend'` | `'lltrend'` | .. math:: y_t &= \mu_t + \varepsilon_t \\ | | | | | \mu_t &= \mu_{t-1} + \beta_{t-1} + \eta_t \\ | | | | | \beta_t &= \beta_{t-1} + \zeta_t | +----------------------------------+--------------------------------------+--------------------+--------------------------------------------------+ | Smooth trend | `'smooth trend'` | `'strend'` | .. math:: y_t &= \mu_t + \varepsilon_t \\ | | | | | \mu_t &= \mu_{t-1} + \beta_{t-1} \\ | | | | | \beta_t &= \beta_{t-1} + \zeta_t | +----------------------------------+--------------------------------------+--------------------+--------------------------------------------------+ | Random trend | `'random trend'` | `'rtrend'` | .. math:: y_t &= \mu_t \\ | | | | | \mu_t &= \mu_{t-1} + \beta_{t-1} \\ | | | | | \beta_t &= \beta_{t-1} + \zeta_t | +----------------------------------+--------------------------------------+--------------------+--------------------------------------------------+ Following the fitting of the model, the unobserved level and trend component time series are available in the results class in the `level` and `trend` attributes, respectively. **Seasonal** The seasonal component is modeled as: .. math:: \gamma_t = - \sum_{j=1}^{s-1} \gamma_{t+1-j} + \omega_t \\ \omega_t \sim N(0, \sigma_\omega^2) The periodicity (number of seasons) is s, and the defining character is that (without the error term), the seasonal components sum to zero across one complete cycle. The inclusion of an error term allows the seasonal effects to vary over time (if this is not desired, :math:`\sigma_\omega^2` can be set to zero using the `stochastic_seasonal=False` keyword argument). This component results in one parameter to be selected via maximum likelihood: :math:`\sigma_\omega^2`, and one parameter to be chosen, the number of seasons `s`. Following the fitting of the model, the unobserved seasonal component time series is available in the results class in the `seasonal` attribute. **Cycle** The cyclical component is intended to capture cyclical effects at time frames much longer than captured by the seasonal component. For example, in economics the cyclical term is often intended to capture the business cycle, and is then expected to have a period between "1.5 and 12 years" (see Durbin and Koopman). .. math:: c_{t+1} & = \rho_c (\tilde c_t \cos \lambda_c t + \tilde c_t^* \sin \lambda_c) + \tilde \omega_t \\ c_{t+1}^* & = \rho_c (- \tilde c_t \sin \lambda_c t + \tilde c_t^* \cos \lambda_c) + \tilde \omega_t^* \\ where :math:`\omega_t, \tilde \omega_t iid N(0, \sigma_{\tilde \omega}^2)` The parameter :math:`\lambda_c` (the frequency of the cycle) is an additional parameter to be estimated by MLE. If the cyclical effect is stochastic (`stochastic_cycle=True`), then there is another parameter to estimate (the variance of the error term - note that both of the error terms here share the same variance, but are assumed to have independent draws). If the cycle is damped (`damped_cycle=True`), then there is a third parameter to estimate, :math:`\rho_c`. In order to achieve cycles with the appropriate frequencies, bounds are imposed on the parameter :math:`\lambda_c` in estimation. These can be controlled via the keyword argument `cycle_period_bounds`, which, if specified, must be a tuple of bounds on the **period** `(lower, upper)`. The bounds on the frequency are then calculated from those bounds. The default bounds, if none are provided, are selected in the following way: 1. If no date / time information is provided, the frequency is constrained to be between zero and :math:`\pi`, so the period is constrained to be in :math:`[0.5, \infty]`. 2. If the date / time information is provided, the default bounds allow the cyclical component to be between 1.5 and 12 years; depending on the frequency of the endogenous variable, this will imply different specific bounds. Following the fitting of the model, the unobserved cyclical component time series is available in the results class in the `cycle` attribute. **Irregular** The irregular components are independent and identically distributed (iid): .. math:: \varepsilon_t \sim N(0, \sigma_\varepsilon^2) **Autoregressive Irregular** An autoregressive component (often used as a replacement for the white noise irregular term) can be specified as: .. math:: \varepsilon_t = \rho(L) \varepsilon_{t-1} + \epsilon_t \\ \epsilon_t \sim N(0, \sigma_\epsilon^2) In this case, the AR order is specified via the `autoregressive` keyword, and the autoregressive coefficients are estimated. Following the fitting of the model, the unobserved autoregressive component time series is available in the results class in the `autoregressive` attribute. **Regression effects** Exogenous regressors can be pass to the `exog` argument. The regression coefficients will be estimated by maximum likelihood unless `mle_regression=False`, in which case the regression coefficients will be included in the state vector where they are essentially estimated via recursive OLS. If the regression_coefficients are included in the state vector, the recursive estimates are available in the results class in the `regression_coefficients` attribute. See Also -------- dismalpy.ssm.mlemodel.MLEModel dismalpy.ssm.kalman_smoother.KalmanSmoother dismalpy.ssm.kalman_filter.KalmanFilter dismalpy.ssm.representation.Representation References ---------- .. [1] Durbin, James, and Siem Jan Koopman. 2012. Time Series Analysis by State Space Methods: Second Edition. Oxford University Press. """ def filter(self, params, transformed=True, cov_type=None, return_ssm=False, **kwargs): params = np.array(params, ndmin=1) # Transform parameters if necessary if not transformed: params = self.transform_params(params) transformed = True # Get the state space output result = super(UnobservedComponents, self).filter( params, transformed, cov_type, return_ssm=True, **kwargs) # Wrap in a results object if not return_ssm: result_kwargs = {} if cov_type is not None: result_kwargs['cov_type'] = cov_type result = UnobservedComponentsResultsWrapper( UnobservedComponentsResults(self, params, result, **result_kwargs) ) return result filter.__doc__ = MLEMixin.filter.__doc__ def smooth(self, params, transformed=True, cov_type=None, return_ssm=False, **kwargs): params = np.array(params, ndmin=1) if not transformed: params = self.transform_params(params) transformed = True # Get the state space output result = super(UnobservedComponents, self).smooth( params, transformed, cov_type, return_ssm=True, **kwargs) # Wrap in a results object if not return_ssm: result_kwargs = {} if cov_type is not None: result_kwargs['cov_type'] = cov_type result = UnobservedComponentsResultsWrapper( UnobservedComponentsResults(self, params, result, **result_kwargs) ) return result smooth.__doc__ = MLEMixin.smooth.__doc__
[docs]class UnobservedComponentsResults(MLEResultsMixin, structural.UnobservedComponentsResults): """ Class to hold results from fitting an unobserved components model. Parameters ---------- model : UnobservedComponents instance The fitted model instance Attributes ---------- specification : dictionary Dictionary including all attributes from the unobserved components model instance. See Also -------- dismalpy.ssm.mlemodel.MLEResults dismalpy.ssm.kalman_smoother.SmootherResults dismalpy.ssm.kalman_filter.FilterResults dismalpy.ssm.representation.FrozenRepresentation """ pass
class UnobservedComponentsResultsWrapper( mlemodel.MLEResultsWrapper): _attrs = {} _wrap_attrs = wrap.union_dicts( mlemodel.MLEResultsWrapper._wrap_attrs, _attrs) _methods = {} _wrap_methods = wrap.union_dicts( mlemodel.MLEResultsWrapper._wrap_methods, _methods) wrap.populate_wrapper(UnobservedComponentsResultsWrapper, UnobservedComponentsResults)